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Created date
Added script to download, check, and unpack interpro dataset.
!47
· created
Jul 01, 2022
by
Lankveld, Thijs van
pantools_v3
Merged
Approved
13
updated
Jul 20, 2022
Fix phase information of CDS nodes for translation of mRNA to protein
!46
· created
Jun 30, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
1
updated
Jul 14, 2022
Fixed incorrect naming in header of 'kmer_classification_overview.csv'
!45
· created
Jun 24, 2022
by
Jonkheer, Eef
master
Merged
Approved
0
updated
Jun 24, 2022
Bugfix locate jar
!44
· created
Jun 21, 2022
by
Workum, Dirk-Jan van
master
Merged
1
1
updated
Jun 21, 2022
Added Picocli argument parsing and beans validation in cli package.
4 of 4 checklist items completed
!43
· created
Jun 14, 2022
by
Robin van Esch
master
Merged
Approved
1
140
updated
Aug 18, 2022
Update CHANGELOG.md
!42
· created
May 19, 2022
by
Jonkheer, Eef
master
Merged
0
updated
May 19, 2022
Add CI pipeline
!41
· created
May 13, 2022
by
Moed, Matthijs
master
Merged
Approved
0
updated
May 13, 2022
Colourblind friendly plots
!40
· created
May 04, 2022
by
Jonkheer, Eef
master
Merged
0
updated
May 04, 2022
removing identifiers_incorrect_for_fasttree and uniquifying all sequences that are input for MSA
!39
· created
Apr 05, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Apr 06, 2022
replace manual gff parsing by htsjdk gff parsing for add_annotations
6 of 6 checklist items completed
!38
· created
Mar 29, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
1
1
updated
Jun 21, 2022
make ignoring of polytomies default for ASTRAL-PRO
!37
· created
Mar 28, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
1
updated
Mar 29, 2022
High freq kmer classification
!36
· created
Mar 25, 2022
by
Jonkheer, Eef
master
Merged
Approved
0
updated
Mar 25, 2022
let core_snp_tree search for alignment with updated msaNames variable instead...
!35
· created
Mar 14, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Mar 18, 2022
small improvement to running fasttree
!34
· created
Mar 09, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Mar 09, 2022
Delete NetBeans-specific files and directories. Close #9.
!33
· created
Feb 24, 2022
by
Moed, Matthijs
master
Merged
Approved
0
updated
Feb 25, 2022
Rollback annotation when annotation unsuccessful
!32
· created
Feb 22, 2022
by
Jonkheer, Eef
master
Merged
Approved
0
updated
Feb 22, 2022
Hotfix msa protein alignment trees
!31
· created
Feb 18, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Feb 18, 2022
Antismash update
!30
· created
Feb 18, 2022
by
Jonkheer, Eef
master
Merged
Approved
6
updated
Apr 15, 2024
Include version and commit ID
!29
· created
Feb 16, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Feb 18, 2022
Reorganise all MSA functionalities in a novel class
!28
· created
Feb 14, 2022
by
Workum, Dirk-Jan van
master
Merged
Approved
0
updated
Feb 18, 2022
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