Merge requests · bioinformatics / PanTools

Bugfix msa mode

!70 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- MERGED
- Approved
- 0
updated Sep 13, 2022
Bug fix classification group_info error when not using `--node`

!69 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- MERGED
- Approved
- 0
updated Sep 13, 2022
Hotfix for command line validation and usage logging

!68 · created Sep 12, 2022 by Esch, Roel van master
- MERGED
- Approved
- 2
updated Sep 13, 2022
Additional annotation check whether the sequence ID exists in a given genome

!67 · created Sep 08, 2022 by Workum, Dirk-Jan van master
- MERGED
- Approved
- 0
updated Sep 09, 2022
Fix add_antismash, go_enrichment and Fisher exact p-value calculation

!66 · created Sep 08, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 10
updated Sep 09, 2022
Fixing checking invalid gff files where a feature is its own parent

!65 · created Sep 05, 2022 by Workum, Dirk-Jan van master
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- Approved
- 0
updated Sep 05, 2022
Hotfix for cli validation package

!64 · created Sep 02, 2022 by Esch, Roel van master
- CLOSED
- 0
updated Sep 08, 2022
Remove URL validation with com.* package, replace with URI creation.

!63 · created Aug 24, 2022 by Moed, Matthijs master
- CLOSED
- 1
updated Aug 25, 2022
Added Junit5 unit tests for functions in ProteomeLayer.java

!62 · created Aug 22, 2022 by Esch, Roel van master
- MERGED
- Approved
- 2
updated Aug 30, 2022
Resolved issue in kmer distance tables when skipping genomes

!61 · created Aug 10, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 1
updated Aug 11, 2022
Fix adding annotations 4 of 4 checklist items completed

!60 · created Aug 10, 2022 by Workum, Dirk-Jan van master
- MERGED
- Approved
- 0
updated Aug 12, 2022
COG function_overview fix

!59 · created Aug 09, 2022 by Jonkheer, Eef master
- MERGED
- 0
updated Aug 10, 2022
Remove phenotype function

!58 · created Jul 25, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 14
updated Jul 27, 2022
Update README.md

!57 · created Jul 21, 2022 by Jonkheer, Eef master
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- 0
updated Jul 21, 2022
include readthedocs in readme and changelog and change default intellij...

!56 · created Jul 21, 2022 by Workum, Dirk-Jan van master
- MERGED
- Approved
- 0
updated Jul 21, 2022
Improved file type recognition for add_functions

!55 · created Jul 21, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 2
updated Jul 22, 2022
Fix astral pro

!54 · created Jul 20, 2022 by Workum, Dirk-Jan van master
- MERGED
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- 0
updated Jul 20, 2022
Bugfix absent phase information in annotation file

!53 · created Jul 15, 2022 by Workum, Dirk-Jan van master
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- Approved
- 0
updated Jul 20, 2022
update changelog with recent changes

!52 · created Jul 14, 2022 by Workum, Dirk-Jan van master
- MERGED
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- 0
updated Jul 14, 2022
Add function subselection

!51 · created Jul 08, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 5
updated Jul 14, 2022