Merge requests · bioinformatics / PanTools

Pantools v3

!1 · created Mar 08, 2021 by Smit, Sandra pantools_v3
- MERGED
- Approved
- 1
updated Mar 08, 2021
Pantools v3

!2 · created Mar 09, 2021 by Jonkheer, Eef pantools_v3
- MERGED
- Approved
- 0
updated Mar 09, 2021
Pantools update in v3

!3 · created Mar 31, 2021 by Smit, Sandra pantools_v3
- CLOSED
- 0
updated Mar 31, 2021
Pantools v3 update

!4 · created Mar 31, 2021 by Smit, Sandra pantools_v3
- MERGED
- 0
updated Mar 31, 2021
Merge pantrools v3

!5 · created Nov 25, 2021 by Lankveld, Thijs van master
- MERGED
- 1
- 0
updated Nov 25, 2021
Application note implementation

!6 · created Nov 25, 2021 by Lankveld, Thijs van master
- MERGED
- 0
updated Nov 26, 2021
Added option to select different BLOSUM matrix when calculating protein similarity

!7 · created Dec 02, 2021 by Jonkheer, Eef master
- MERGED
- 0
updated Dec 02, 2021
added compilation information to README.md and update consensus_tree help

!8 · created Dec 02, 2021 by Workum, Dirk-Jan van master
- MERGED
- 0
updated Dec 02, 2021
Fix Ant's bundled jar generation

!9 · created Dec 06, 2021 by Moed, Matthijs master
- MERGED
- 0
updated Dec 06, 2021
K-mer classification method improvement

!10 · created Dec 09, 2021 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Dec 09, 2021
Update to PanTools manual

!11 · created Dec 10, 2021 by Jonkheer, Eef master
- MERGED
- Approved
- 1
updated Dec 10, 2021
Update help section

!12 · created Dec 13, 2021 by Jonkheer, Eef master
- MERGED
- Approved
- 3
updated Dec 14, 2021
Reverse completement regions in a --regions-file file now require a minus symbol

!13 · created Dec 14, 2021 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Dec 17, 2021
Update to GO and Pfam functional databases

!14 · created Dec 20, 2021 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Dec 20, 2021
Improved error handling MLSA method

!15 · created Dec 23, 2021 by Jonkheer, Eef master
- MERGED
- 0
updated Dec 23, 2021
Migrate to Maven

!16 · created Dec 23, 2021 by Moed, Matthijs master
- MERGED
- Approved
- 1
- 0
updated Dec 23, 2021
Fix nucleotide checks for gzip-compressed input files

!17 · created Dec 23, 2021 by Moed, Matthijs master
- MERGED
- 0
updated Dec 23, 2021
Bugfix core snp nj tree

!18 · created Jan 03, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Jan 05, 2022
Update to the retrieve functionalities

!19 · created Jan 07, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Jan 07, 2022
Resolved an issue in kmer_classification when skipping certain sequences

!20 · created Jan 18, 2022 by Jonkheer, Eef master
- MERGED
- Approved
- 0
updated Jan 18, 2022