Explore projects

nemmap is a single-command pipeline to process bacterial (full 16S) or fungal (full ITS) reads obtained by Nanopore sequencing. This pipeline is developed and intended for internal use by the Laboratory of Nematology (WUR).

Het MNP model zelf.

NEmatology DNA Variant Analysis and Calling pipeline = NEDVAC

PanTools, WUR Bioinformatics

HPC Deployment toolbox used at WUR for Anunna

NEmatology RNA Variant Analysis and Calling pipeline = NERVAC

A portal for the space 2 place community. The portal includes the innovativefertilization optimization app.

A package that prepare video recordings to be used by deeplabcut (simple 2D/3D tracking, cropping and stitching). Then use deeplabcut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

In this repository the various scripts for my thesis are found