1. 01 May, 2018 2 commits
  2. 30 Apr, 2018 6 commits
  3. 26 Apr, 2018 1 commit
  4. 13 Apr, 2018 2 commits
  5. 09 Apr, 2018 2 commits
    • Jorge Navarro Muñoz's avatar
      CHANGES IN DEFAULT PARAMETERS · 15c0ce69
      Jorge Navarro Muñoz authored
      - hybrids mode is now default. Use --hybrids-off to turn it off
      - cutoffs now has a single default value: 0.3
      - clans clustering is now activated by default. Use --clans-off to turn
      it off
      - clan_cutoff is now 0.3 0.7 (i.e. will use GCFs defined at 0.3 and will
      form GCC using average distance between GCFs of 0.7 or less)
      15c0ce69
    • Jorge Navarro Muñoz's avatar
      MIBiG mode bugfix · a59c1eb9
      Jorge Navarro Muñoz authored
      Fixes issue #5. Some BGCs in MIBiG that don't have any domains were not
      being removed from the mibig_set
      a59c1eb9
  6. 08 Apr, 2018 2 commits
  7. 05 Apr, 2018 4 commits
  8. 04 Apr, 2018 2 commits
  9. 03 Apr, 2018 2 commits
  10. 01 Apr, 2018 3 commits
  11. 23 Mar, 2018 2 commits
    • Jorge Navarro Muñoz's avatar
      New Feature: Query BGC · 1415b5b2
      Jorge Navarro Muñoz authored
      Use a designated BGC with --query_bgc (not necessarily in your
      --inputdir) and search only for similar (up to max(cutoffs)) BGCs in
      your data set.
      - TODO: after the first round of QBGC vs all, delete distance
      information from all non-relevant distances
      1415b5b2
    • Jorge Navarro Muñoz's avatar
      Bugfix: previous runs are shown in the html again · 6f040ce1
      Jorge Navarro Muñoz authored
      - bigscape_results.js from the html template files was overwriting the
      generated version with information about previous runs
      6f040ce1
  12. 21 Mar, 2018 5 commits
  13. 16 Mar, 2018 1 commit
  14. 08 Mar, 2018 1 commit
  15. 07 Mar, 2018 1 commit
  16. 05 Mar, 2018 3 commits
  17. 01 Mar, 2018 1 commit