1. 20 Nov, 2019 1 commit
    • Jorge Navarro Muñoz's avatar
      Bugfix · a4b50473
      Jorge Navarro Muñoz authored
      Having a single GCF prevented GCC calling, but also exited the rest of
      the function that writes the clustering and visualization results. Now
      results are properly written in that specific case.
      a4b50473
  2. 11 Oct, 2019 2 commits
  3. 07 Jun, 2019 1 commit
  4. 04 Jun, 2019 1 commit
    • Jorge Navarro Muñoz's avatar
      Bugfix: · 36fb0b23
      Jorge Navarro Muñoz authored
      - '--mibig', '--mibig13'  and '--query_bgc' options are working again
      36fb0b23
  5. 03 Jun, 2019 2 commits
  6. 01 Jun, 2019 1 commit
  7. 15 Nov, 2018 2 commits
  8. 14 Nov, 2018 2 commits
  9. 13 Nov, 2018 8 commits
  10. 12 Nov, 2018 2 commits
  11. 05 Oct, 2018 1 commit
  12. 01 Oct, 2018 1 commit
    • Jorge Navarro Muñoz's avatar
      Input sanitation and update to included MIBiG BGCs · 48579954
      Jorge Navarro Muñoz authored
      - Gene and protein names will have colons in their names substituted by
      underscores to avoid issues further on (colons are used internally to
      split information contained in the sequences' header)
      - Added a new bundle of MIBiG BGCs (version 1.4). Version 1.3 is still
      kept for reproducibility
      48579954
  13. 07 Sep, 2018 1 commit
  14. 03 Sep, 2018 1 commit
  15. 06 Aug, 2018 4 commits
  16. 03 Aug, 2018 3 commits
  17. 19 Jun, 2018 1 commit
  18. 05 Jun, 2018 1 commit
  19. 23 May, 2018 3 commits
  20. 22 May, 2018 1 commit
    • Jorge Navarro Muñoz's avatar
      New feature: domain whitelist · ddf670d0
      Jorge Navarro Muñoz authored
      - Include only BGCs that contain a user-defined list of domain accessions. In
      this case, the list is contained in the domain_whitelist.txt file (which
      already includes an example). Toggle with --domain_whitelist
      ddf670d0
  21. 18 May, 2018 1 commit