Commit f70b6e99 authored by Haarst, Jan van's avatar Haarst, Jan van
Browse files

Remove example data

parent ab283567
......@@ -65,44 +65,3 @@ if __name__ == '__main__':
plt.legend(loc="upper right",shadow=True, fancybox=True)
# Store plot
plt.savefig("scans.png")
"""
Example data :
# BNX File Version: 1.2
# Label Channels: 1
# Nickase Recognition Site 1:
# Min Molecule Length (Kb): 150
# Label SNR Filter Type: Static
# Min Label SNR: 2.750
# Software Version: 2.1.0.5973
#rh SourceFolder InstrumentSerial Time NanoChannelPixelsPerScan StretchFactor BasesPerPixel NumberofScans ChipId Flowcell LabelSNRFilterType MinMoleculeLength MinLabelSNR RunId
# Run data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-02_10_24\Detect Molecules ALPHAUNIT07 10/2/2014 10:24:31 AM 68819821 0.85 490.646636962891 12 20249,11887,8/27/2014,850015130 1 Dynamic 100 4.481689 1
# Run Data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-01_10_17\Detect Molecules ALPHAUNIT07 10/1/2014 10:17:14 AM 68819821 0.85 490.646636962891 3 20249,11887,8/27/2014,850015130 1 Dynamic 100 3.669297 2
# Run Data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-02_17_40\Detect Molecules ALPHAUNIT07 10/2/2014 5:40:56 PM 68819821 0.85 490.646636962891 30 20249,11887,8/27/2014,850015130 1 Dynamic 100 4.0552 3
# Run Data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-07_09_52\Detect Molecules ALPHAUNIT07 10/7/2014 9:52:50 AM 68819821 0.85 490.646636962891 30 20249,11887,8/27/2014,850015138 1 Dynamic 100 4.481689 4
# Run Data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-07_15_57\Detect Molecules ALPHAUNIT07 10/7/2014 3:57:36 PM 68819821 0.85 490.646636962891 30 20249,11887,8/27/2014,850015138 1 Dynamic 100 4.481689 5
# Run Data Z:\Labdata\AlphaUnit_07\2014-10\92544_tomato_nuclei_2014-10-08_18_51\Detect Molecules ALPHAUNIT07 10/8/2014 6:51:47 PM 68819821 0.85 490.646636962891 30 20249,11897,9/19/2014,850015323 1 Dynamic 100 4.953032 6
# Run Data Z:\Labdata\AlphaUnit_04\2014-10\92544_tomato_nuclei_2014-10-09_16_33\Detect Molecules ALPHAUNIT04 10/9/2014 4:33:42 PM 68819821 0.85 490.646636962891 30 20249,11897,9/19/2014,850015349 1 Static 0 0 7
# Run Data foo\swap92571_tomato_nuclei_2014-10-23_17_27\bar B023 10/23/2014 5:27:39 PM 69207771 0.85 560.93212890625 30 20249,11887,8/27/2014,850015110 1 Static 0 0 8
# Run Data foo\swap92571_tomato_nuclei_2014-10-23_18_22\bar B023 10/23/2014 6:22:45 PM 69207771 0.85 560.93212890625 30 20249,11887,8/27/2014,850015110 2 Static 0 0 9
# Quality Score QX01: SNR
# Quality Score QX02: Ave Intensity
#0h LabelChannel MoleculeId Length AvgIntensity SNR NumberofLabels OriginalMoleculeId ScanNumber ScanDirection ChipId Flowcell RunId GlobalScanNumber
#0f int int float float float int int int int string int int int
#1h LabelChannel LabelPositions[N]
#1f int float
#2h LabelChannel LabelPositions[N]
#2h int float
#Qh QualityScoreID QualityScores[N]
#Qf str float
0 3 286801.4 0.177417 42.720 23 3 1 -1 20249,11887,8/27/2014,850015130 1 1 1
1 12681.6 34673.8 41179.9 44849.6 53791.5 67825.2 69610.3 77348.8 82893.8 88369.7 106001.2 112227.1 133172.5 141298.1 161661.7 169396.6 180201.0 212370.5 221516.8 245870.2 248775.1 276038.5 284017.0 286801.4
QX11 37.3425 33.6353 10.9667 29.1389 18.0582 30.1201 19.3122 13.6342 25.4127 27.4380 40.7450 22.8699 29.0980 11.4947 57.1931 8.3590 64.5878 23.0364 52.9536 18.7634 58.5257 22.7799 31.2551
QX12 0.0841 0.0816 0.0458 0.0708 0.0555 0.1042 0.0725 0.0519 0.0638 0.0674 0.1016 0.0647 0.0727 0.0408 0.1263 0.0393 0.1502 0.0704 0.1481 0.0764 0.1518 0.0577 0.0916
0 4 209794.0 0.117181 20.013 13 4 1 -1 20249,11887,8/27/2014,850015130 1 1 1
1 11480.0 13296.0 17692.7 91294.8 100287.0 102576.2 124496.7 142540.4 143437.5 173266.5 178092.0 201619.3 206410.0 209794.0
QX11 8.3894 32.0272 16.9435 70.4016 42.7193 4.9234 29.2025 16.6782 25.7460 16.2417 24.1204 42.1043 8.1092
QX12 0.0467 0.1062 0.0561 0.1684 0.1221 0.0425 0.0632 0.0575 0.0709 0.0515 0.0655 0.1128 0.0391
"""
\ No newline at end of file
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