Final report

report/Makefile

+DOC=report
+PPT=presentation
 
-report.pdf: report.Rmd references.bib
-	R -e "source('../utilities.R')" -e "rmarkdown::render('report.Rmd', output_format='pdf_document')"
+all: $(DOC).pdf $(PPT).pdf
 
-references.bib: report.Rmd
-#	pubs refs report.Rmd
-	pubs allrefs report.Rmd
+$(DOC).pdf: $(DOC).Rmd references.bib
+	R -e "source('../utilities.R')" -e "rmarkdown::render('$(DOC).Rmd', output_format='pdf_document')"
 
-presentation.pdf: presentation.Rmd
-	R -e "source('../utilities.R')" -e "rmarkdown::render('presentation.Rmd')"
+references.bib: $(DOC).Rmd
+#	pubs refs $(DOC).Rmd
+	pubs allrefs $(DOC).Rmd
 
-references.bib: report.Rmd
+$(PPT).pdf: $(PPT).md
+	R -e "rmarkdown::render('$(PPT).md')"
+
+references.bib: $(DOC).Rmd
+
+.PHONY: all clean cleanall
+
+clean:
+	rm -rf *_cache
+
+cleanall: clean
+	rm -rf *_files
+	rm -f *.pdf *.tex *.log *.aux

report/beamerthemewurnew.sty

@@ -63,7 +63,7 @@
 \setbeamercolor*{section number projected}{bg=wurazure,fg=wurazure} % toc section color
 \setbeamercolor*{subsection number projected}{bg=wurazure,fg=wurazure} % toc subsection color
 \setbeamercolor*{headline}{parent=normal text}
-\pgfdeclareimage[height=.8\logobarheight]{logo}{figs/logo.png}
+\pgfdeclareimage[height=.8\logobarheight]{logo}{images/logo.png}
 
 % white sheet colors
 \def\whitesheets{
@@ -73,7 +73,7 @@
   \setbeamercolor*{block body}{bg=wurlightgray,fg=wurazure} % colors in the body of a block
   \setbeamercolor*{section number projected}{bg=wurazure,fg=wurazure} % toc section color
   \setbeamercolor*{subsection number projected}{bg=wurazure,fg=wurazure} % toc subsection color
-  \pgfdeclareimage[height=.7\logobarheight]{logo}{figs/logo.png}
+  \pgfdeclareimage[height=.7\logobarheight]{logo}{images/logo.png}
   \usebeamercolor[fg]{normal text} 
 }
 
@@ -182,7 +182,7 @@
 %                                                                     picture bar
 
 % user-command to change the picture bar used:
-\pgfdeclareimage[height=\pictsize,width=0.67\textwidth,interpolate=true]{front}{figs/front.jpg}
+\pgfdeclareimage[height=\pictsize,width=0.67\textwidth,interpolate=true]{front}{images/front.jpg}
 
 \titlegraphic{
 	\pgfuseimage{custom}