Commit dbcbc82a authored by Iago Mosqueira's avatar Iago Mosqueira
Browse files

Progress in report, start with presentation

parent d3460236
> btsisis <- aap(stock, indices[c("BTS-ISIS", "SNS")], control=control,
+ wkdir="model/aap/isis")
Model and results are stored in working directory [model/aap/isis-15]
Initial statistics: 262 variables; iteration 0; function evaluation 0; phase 1
Function value 8.8122680e+04; maximum gradient component mag -5.7518e+06
- final statistics:
267 variables; iteration 297; function evaluation 326
Function value -1.2230e+03; maximum gradient component mag 6.1724e-05
> btsgam <- aap(stock, indices[c("GAM", "SNS")], control=control,
+ wkdir="model/aap/base", stdfile=btsisis@stdfile)
Model and results are stored in working directory [model/aap/base-5]
Initial statistics: 262 variables; iteration 0; function evaluation 0; phase 1
Function value -5.1683661e+02; maximum gradient component mag -3.3264e+04
- final statistics:
267 variables; iteration 65; function evaluation 91
Function value -1.3242e+03; maximum gradient component mag 5.0039e-05
> gamisis <- aap(stock, indices[c("GAM-ISIS", "SNS")], control=control,
+ wkdir="model/aap/gisis", stdfile=btsisis@stdfile)
Model and results are stored in working directory [model/aap/gisis-1]
Initial statistics: 262 variables; iteration 0; function evaluation 0; phase 1
Function value -8.0530928e+02; maximum gradient component mag -1.4266e+04
Intermediate statistics: 262 variables; iteration 10; function evaluation 21; phase 1
......@@ -5,3 +5,8 @@ report.pdf: report.Rmd references.bib
references.bib: report.Rmd
# pubs refs report.Rmd
pubs allrefs report.Rmd
presentation.pdf: presentation.Rmd
R -e "source('../utilities.R')" -e "rmarkdown::render('presentation.Rmd')"
references.bib: report.Rmd
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---
title: "Stock assessment of North Sea sole (sol.27.4) using the Aarts & Poos (AAP) model."
subtitle: "ICES WKFlatNSCS benchmark. Copenhagen, 17-21 February 2020"
author: Iago MOSQUEIRA, Esther BEUKHOF
institute: Wageningen Marine Research (WMR), IJmuiden, The Netherlands.
fontsize: 10pt
output:
wmrkdown::wur:
slide_level: 1
custom: figs/custom.png
tags: [sol.27.4 SA]
---
```{r knitr, echo=FALSE, message=FALSE}
library(knitr)
opts_chunk$set(echo=FALSE, message=FALSE, warning=FALSE, results="hide",
cache=TRUE, fig.width=5, fig.height=5, fig.pos='H', fig.align='center',
out.width='75%')
```
# SOL.27.4 2020 benchmark
# WGNSSK 2019 Issue list
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\title{Stock assessment of North Sea sole (sol.27.4) using the Aarts \& Poos
(AAP) model.}
\subtitle{ICES WKFlatNSCS benchmark. Copenhagen, 17-21 February 2020}
\author{Iago MOSQUEIRA, Esther BEUKHOF}
\date{}
\institute{Wageningen Marine Research (WMR), IJmuiden, The Netherlands.}
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\begin{frame}{SOL.27.4 2020 benchmark}
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\begin{frame}{WGNSSK 2019 Issue list}
\protect\hypertarget{wgnssk-2019-issue-list}{}
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\end{document}
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