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cwl
Commits
b6219b59
Commit
b6219b59
authored
Apr 15, 2022
by
Nijsse, Bart
Browse files
busco folder fix
parent
e8158958
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1
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cwl/workflows/workflow_metagenomics_binning.cwl
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b6219b59
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@@ -8,13 +8,14 @@ requirements:
SubworkflowFeatureRequirement: {}
ScatterFeatureRequirement: {}
label: Metagenomic
s workflow
label: Metagenomic
binning from assembly
doc: |
Workflow for Metagenomics from raw reads to annotated bins.
Steps:
- MetaBAT2 (binning)
- CheckM (bin completeness and contamination)
- GTDB-Tk (bin taxonomic classification)
- BUSCO (bin completeness)
outputs:
metabat2_output:
...
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@@ -31,7 +32,7 @@ outputs:
label: BUSCO
doc: BUSCO output directory
type: Directory
outputSource:
checkm
_files_to_folder/results
outputSource:
busco
_files_to_folder/results
gtdbtk_output:
label: GTDB-Tk
doc: GTDB-Tk output directory
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Nijsse, Bart
@nijss011
mentioned in commit
29498711
·
Apr 19, 2022
mentioned in commit
29498711
mentioned in commit 2949871165ed6299fc4ca98154ca99b2f75b34e6
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