Commit bb763350 authored by Nijsse, Bart's avatar Nijsse, Bart
Browse files

new summary of bins output

parent c11c58c0
......@@ -343,7 +343,7 @@ steps:
threads: threads
step:
default: 1
out: [metabat2_output,checkm_output,gtdbtk_output,busco_output]
out: [metabat2_output, checkm_output, gtdbtk_output, busco_output, bins_summary]
#############################################
#### Move to folder if not part of a workflow
......@@ -486,6 +486,10 @@ steps:
run: ../expressions/files_to_folder.cwl
in:
binning: binning
files:
source: [workflow_binning/bins_summary]
linkMerge: merge_flattened
pickValue: all_non_null
folders:
source: [workflow_binning/metabat2_output, workflow_binning/checkm_output, workflow_binning/gtdbtk_output, workflow_binning/busco_output]
linkMerge: merge_flattened
......
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