Commit d82c1860 authored by Nijsse, Bart's avatar Nijsse, Bart
Browse files

better step naming


Former-commit-id: 69fc4e15550670b2a9c9e30b5e883138278be13b [formerly a21c2407]
Former-commit-id: 1b10eb900346986aae40239d0738c2a4f978cd8c
parent 5418543b
......@@ -66,7 +66,7 @@ inputs:
steps:
#############################################
#### BBmap read mapping (illumina reads) for polishing
readmapping:
readmapping_pilon:
label: BBMap read mapping
doc: Illumina read mapping using BBmap on assembled contigs
run: ../bbmap/bbmap.cwl
......@@ -86,7 +86,7 @@ steps:
run: ../samtools/sam_to_sorted-bam.cwl
in:
identifier: identifier
sam: readmapping/sam
sam: readmapping_pilon/sam
threads: threads
out: [sortedbam]
#############################################
......
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