1. 21 Apr, 2022 6 commits
  2. 19 Apr, 2022 1 commit
    • Jasper Koehorst's avatar
      name fix for fastqc · d944d61d
      Jasper Koehorst authored
      
      Former-commit-id: 77c317bfd2da9fc38bf2adedbed48dbfc059468a [formerly f8fa0ed6]
      Former-commit-id: 2eeb313dfcd980e202979da799dffee3557e8bcc
      d944d61d
  3. 18 Apr, 2022 3 commits
  4. 15 Apr, 2022 15 commits
  5. 13 Apr, 2022 6 commits
    • Nijsse, Bart's avatar
      fastq input strings · deff1c75
      Nijsse, Bart authored
      
      Former-commit-id: 73883e0b3a1f8bf6c9412674986abc6dae318c2e [formerly 47cf35b7]
      Former-commit-id: b1191ef198d9a0e414189fe8ae0757035046e654
      deff1c75
    • Nijsse, Bart's avatar
      fastq input strings · 9266b981
      Nijsse, Bart authored
      
      Former-commit-id: 293daee280fcf23c4239158bf21f8e3629b8274f [formerly 9bce68e3]
      Former-commit-id: a37329e172344bbc9f8cde79397423fe83850e41
      9266b981
    • Nijsse, Bart's avatar
      naming and fastq input strings · 02794e3d
      Nijsse, Bart authored
      
      Former-commit-id: 787b03110d04ef6288dde84615f955b9d88c1300 [formerly d7688b07]
      Former-commit-id: 5036f16af7ff6230fd50aaa12dca4abc0ab3797c
      02794e3d
    • Nijsse, Bart's avatar
      added stdErr log output · 23bd6143
      Nijsse, Bart authored
      
      Former-commit-id: 2ce985462cdaa299147b44cf588be9513d6aa67f [formerly 1ef34700]
      Former-commit-id: f88a26fb6179d6cdbd8aa6ed06be4b05c537899b
      23bd6143
    • Nijsse, Bart's avatar
      output naming · e5b7d7bf
      Nijsse, Bart authored
      
      Former-commit-id: 6d5fb0bd07eb0b27daaa2691951140661229e08c [formerly 2597bd89]
      Former-commit-id: 7e1b0d66852cc26f3d883dde5b17b72b57884aac
      e5b7d7bf
    • Nijsse, Bart's avatar
      string file paths as input · ea9ecc3e
      Nijsse, Bart authored
      
      Former-commit-id: 92c421a179e0ddda8b28ffa90189fcb4e007b962 [formerly a85e9a91]
      Former-commit-id: 394022a4eefb578d409cf9e083a3ca11bc55d387
      ea9ecc3e
  6. 12 Apr, 2022 2 commits
  7. 11 Apr, 2022 1 commit
  8. 08 Apr, 2022 6 commits
    • Nijsse, Bart's avatar
      obsolete · e48ede0d
      Nijsse, Bart authored
      
      Former-commit-id: 0ef94b963cbb296b70de13bcbd8f73f17f6a468a [formerly d9be0fe7]
      Former-commit-id: 28844d6eb52908b562d67f36767b3d6daf56aed6
      e48ede0d
    • Nijsse, Bart's avatar
      obsolete · 48c731b5
      Nijsse, Bart authored
      
      Former-commit-id: a9314df6ed6c98014faaa795ade5ba034547b5e7 [formerly 3e39274a]
      Former-commit-id: 8c143e55df80fb675f99be48d945a97853142088
      48c731b5
    • Nijsse, Bart's avatar
      param rename · b4fb63d9
      Nijsse, Bart authored
      
      Former-commit-id: ce4fd7bfadb5b7d057475fde64b08798f6c927f2 [formerly 7033d4ea]
      Former-commit-id: dbdf42e83ada3f52e6e16591cf4e103c0cd72313
      b4fb63d9
    • Nijsse, Bart's avatar
      removed bbmap rpkm output · 1294c483
      Nijsse, Bart authored
      
      Former-commit-id: e202f197159ab5160e557f1f8b44750d0a289cb5 [formerly 7f8b1aac]
      Former-commit-id: 7527fdc7a32d339bd64a140b425b0e365bb49290
      1294c483
    • Nijsse, Bart's avatar
      output mapped or unmapped reads · 96771432
      Nijsse, Bart authored
      
      Former-commit-id: ce46bdffbe73c98c3bcfe02d7ed972547bf902fa [formerly e2291571]
      Former-commit-id: 0b85d4970d5344e583fc00bd2ef8c351940a719f
      96771432
    • Nijsse, Bart's avatar
      deduplicate reads and use mapped or unmapped reads · c4384e3c
      Nijsse, Bart authored
      
      Former-commit-id: c40d8ed193eb2f68ae0c65ec9b864061b754b1a9 [formerly fbb34ef4]
      Former-commit-id: 5e080878301dabed33290c215ffd91005b917108
      c4384e3c