sync setup function added

sync.sh

@@ -8,9 +8,9 @@
 #============================================================================
 DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
 
-usage() { echo "Usage: $0 [-c|--cwl] [-r|--references] [-i|--infrastructure] [-a|--all]" 1>&2; exit 1; }
+usage() { echo "Usage: $0 [-c|--cwl] [-r|--references] [-i|--infrastructure] [-s|--setup] [-a|--all]" 1>&2; exit 1; }
 
-vars=$(getopt -o c:r:i:a: --long cwl:,references:,infrastructure:,all:)
+vars=$(getopt -o c:r:i:s:a: --long cwl:,references:,infrastructure:,setup:,all:)
 
 #============================================================================
 # KUBERNETES
@@ -36,12 +36,14 @@ if $runall; then
     sed "s/HOSTNAME/$node/g" $DIR/template_sync_cwl.yaml > $DIR/$node\_cwl.yaml
     sed "s/HOSTNAME/$node/g" $DIR/template_sync_infrastructure.yaml > $DIR/$node\_infrastructure.yaml
     sed "s/HOSTNAME/$node/g" $DIR/template_sync_references.yaml > $DIR/$node\_references.yaml
+    sed "s/HOSTNAME/$node/g" $DIR/template_sync_install.yaml > $DIR/$node\_install.yaml
     kubectl apply -f $DIR/$node\_cwl.yaml
     kubectl apply -f $DIR/$node\_infrastructure.yaml
     kubectl apply -f $DIR/$node\_references.yaml
+    kubectl apply -f $DIR/$node\_install.yaml
    
     # Cleanup
-    rm $DIR/$node\_cwl.yaml $DIR/$node\_infrastructure.yaml $DIR/$node\_references.yaml
+    rm $DIR/$node\_cwl.yaml $DIR/$node\_infrastructure.yaml $DIR/$node\_references.yaml $DIR/$node\_install.yaml
 
   done < $DIR/nodes.txt
 
@@ -80,6 +82,16 @@ for opt; do
         rm $DIR/$node\_infrastructure.yaml
       done < $DIR/nodes.txt
 
+      ;;
+          -s|--setup)
+
+      while read node; do
+        sed "s/HOSTNAME/$node/g" $DIR/template_sync_setup.yaml > $DIR/$node\_setup.yaml
+        kubectl apply -f $DIR/$node\_setup.yaml             
+        # Cleanup
+        rm $DIR/$node\_setup.yaml
+      done < $DIR/nodes.txt
+
       ;;
     *)
       usage

template_sync_setup.yaml

+apiVersion: v1
+kind: Pod
+metadata:
+  name: munlock-sync-setup-HOSTNAME
+  namespace: unlock
+  labels:
+    purpose: sync-folder-to-local-node
+spec:
+  containers:
+  - name: munlock-sync-HOSTNAME
+    image: docker-registry.wur.nl/unlock/docker:kubernetes
+    command: ["/bin/sh","-c"]
+    args: ["\
+          echo starting;\
+          chmod +x /unlock/infrastructure/binaries/scripts/setup.sh;\
+          bash -e /unlock/infrastructure/binaries/scripts/setup.sh;\
+          echo finished;\
+          "]
+    volumeMounts:
+    - mountPath: /unlock
+      name: unlock
+  restartPolicy: OnFailure
+  volumes:
+  - name: unlock
+    persistentVolumeClaim:
+      claimName: unlock
+  nodeSelector:
+    kubernetes.io/hostname: HOSTNAME
+
+
+