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The script focuses on assessing tree vitality trends in urban areas of the Netherlands using high-resolution satellite data and vegetation indices. It employs tree segmentation, trend analysis with weighted linear regression, and classification based on slope values. The methodology enables scalable monitoring of tree health and stress, providing valuable insights for urban forestry management and planning.
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ISRIC / SoilGrids / soilgrids.notebooks
European Union Public License 1.2Updated -
A package that prepare video recordings to be used by deeplabcut (simple 2D/3D tracking, cropping and stitching). Then use deeplabcut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates
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Contains Instructions how to set up iRODS for sysadmins and training material for different user goups.
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Blok, Pieter / SizeCNN
Apache License 2.0CNN methods that estimate the diameter of the crop, even when it's occluded.
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Multi Reclass Tool for geospatial rasters.
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Code related to the Natuurverkenning Breder Doelbereik scenario and basiskaarten. Door Hans Roelofsen, WEnR, augustus 2020
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A pipeline to align multiple whole genomes
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Hennessy, Donagh / Test Public Folder
GNU Affero General Public License v3.0Updated -
Code and data for DOREN project; relation between vegetation growth and nitrogen deposition. By Hans Roelofsen, Wieger Wamelink, WEnR, team Biodiversiteit & Beleid. September 2019.
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SSO-Public / PeDViS
GNU General Public License v3.0 or laterUpdated -