Explore projects

Code repository for Hecaton, a tool for CNV detection in plants

scripts and data to reproduce the figures in the manuscript Christian Groß et al. pCADD: SNV prioritisation in Sus scrofa

Decrypt AES-128 encrypted strings from an AWX pg_dump.

Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.

Family-based estimation of polyploid haplotypes using short sequence reads

Haplotype estimation tool for polyploids using NGS data of related individuals

Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.

A convolutional neural network for the purpose of interpretable protein-protein interaction prediction.

ibrowser

Biosynthetic Genes Similarity Clustering and Prospecting Engine.

Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)