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A pipeline to align multiple whole genomes
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Code and data for DOREN project; relation between vegetation growth and nitrogen deposition. By Hans Roelofsen, Wieger Wamelink, WEnR, team Biodiversiteit & Beleid. September 2019.
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SSO-Public / PeDViS
GNU General Public License v3.0 or laterUpdated -
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Aflitos, Saulo Alves / webmummer
MIT LicenseUpdated -
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Aflitos, Saulo Alves / bionanoconverter
MIT LicenseUpdated -
Aflitos, Saulo Alves / cnidaria
MIT LicenseUpdated -
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Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.
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Aflitos, Saulo Alves / kmasker2gff
MIT LicenseUpdated