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This is an adaptation of CloudSPAdes which uses taxonomical annotation of reads additionally to linked reads.

Contains Instructions how to set up iRODS for sysadmins and training material for different user goups.

CNN methods that estimate the diameter of the crop, even when it's occluded.

Demo given Jan. 14th 2019 at Plant and Animal Genome conference in San Diego

Project repository related to the ticks project with RIVM

The code for discovering novel gcGC's in publicly available genomes can be found here.

Contains Instructions how to set up iRODS for sysadmins and training material for different user goups.