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Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.
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this tool is mainly used to convert binary VIC files into ASCII
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Visualize genes in a GenBank file as arrows in SVG format.
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Remote Sensing data preparation for the ROBIN project (Using R)
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ibrowser
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Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.
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Biosynthetic Genes Similarity Clustering and Prospecting Engine.
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard index, a modified Domain Duplicate Score and the Goodman-Kruskal gamma function)
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CIHEAM course material
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Ansible playbooks for configuring WUR services on your linux desktop
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Code for Genomics course goes here