Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.

this tool is mainly used to convert binary VIC files into ASCII

Visualize genes in a GenBank file as arrows in SVG format.

Remote Sensing data preparation for the ROBIN project (Using R)

ibrowser

Simulation pipeline for generation of artificial polyploid genomes, estimation of their haplotypes from Next Generation Sequencing data using HapTree, HapCompass and SDhap, and finally evaluation of the estimation accuracy.

Biosynthetic Genes Similarity Clustering and Prospecting Engine.

Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard index, a modified Domain Duplicate Score and the Goodman-Kruskal gamma function)

CIHEAM course material

Ansible playbooks for configuring WUR services on your linux desktop

Code for Genomics course goes here